Web Tool Variant Review Workbench
Research use only. Do not upload patient-identifying data.

About

Why this tool exists

Variant files are compact and difficult to review directly. This tool turns a VCF into a ranked report with ClinVar matches, conflict flags, and export files that are easier to inspect.

Use case

Review a small set of variants, check known ClinVar records, and export the result in standard formats.

Portfolio project

This web app is part of the Variant Review Workbench portfolio project and shares the same pipeline as the CLI.

Output

Each run produces a report preview plus HTML, JSON, Markdown, summary, and metadata files.

What feedback is useful

  • Whether the upload and run steps are clear without extra explanation.
  • Whether the report output is easy to scan and understand.
  • Whether the labels, counts, and warnings are clear.
  • Whether the export choices match what you would expect to download.
  • Any confusing wording, missing information, or unnecessary steps.

What to include

  • The page or action where the issue appears.
  • What you expected to happen.
  • What actually happened.
  • A screenshot or copied message if one is available.
  • The file type and assembly you used, if relevant.

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